{
  "schema_version": "1.0",
  "generated_at_utc": "2026-07-31T21:23:36+00:00",
  "scope": "Public repository-labelled complete human WES BAM/CRAM alignment objects, including indexed pairs and separately classified downloadable BAMs with no submitted index. Raw FASTQ-only files are summarized separately and are not inserted into the alignment inventory.",
  "counting_denominators": {
    "source_rows": 14905,
    "unique_normalized_alignment_objects": 14878,
    "conservatively_deduplicated_logical_alignments": 14842,
    "extra_public_object_aliases_to_logical_alignments": 36,
    "alignment_download_verified_objects": 14843,
    "verified_indexed_alignment_pairs": 13948,
    "downloadable_alignment_objects_without_verified_index": 895,
    "failed_or_unverified_alignment_objects": 35,
    "downloadable_raw_wes_fastq_files_reported_separately": 120,
    "curated_or_benchmark_complete_wes_objects": 2869,
    "repository_metadata_only_objects_requiring_content_qc": 12009,
    "objects_with_official_alignment_md5": 14400,
    "exact_content_groups_among_md5_objects": 14364,
    "extra_url_aliases_to_exact_content": 36,
    "objects_without_official_alignment_md5": 478,
    "content_group_count_including_url_fallback_for_unknown_md5": 14842,
    "truth_enriched_alignment_objects": 296,
    "independently_supported_brca_positive_alignment_objects": 2,
    "independently_supported_brca_positive_people": 2
  },
  "important_interpretation": [
    "A verified indexed pair is one public alignment URL and its index URL that both passed the source audit's anonymous byte-range test. Complete files were not downloaded during this audit.",
    "A downloadable unindexed BAM passed an alignment byte-range test but has no submitted BAI. It requires full download and local indexing and is not included in the ready indexed-pair total.",
    "Raw FASTQ files are counted separately from alignment objects because they require alignment before LGASieve can use them.",
    "Object count is not patient count. Technical replicates, alternative alignments, and repeated submissions are retained as separate objects.",
    "Exact-content deduplication is performed only with an official MD5 plus byte size. Objects without an MD5 are not guessed to be duplicates.",
    "Repository WXS/WES metadata establishes the discovery claim, not clinical suitability. ENA records in particular require BAM-header, capture-footprint, contamination, depth, and sample-level review.",
    "File size is a triage signal only. Small or very large objects are flagged for review rather than automatically included or excluded as complete WES."
  ],
  "source_row_counts": {
    "public_complete_wes_alignment_inventory_2026-08-01.csv": 2579,
    "public_complete_wes_alignment_inventory_verified_2026-08-01.csv": 5455,
    "seqc2_complete_wes_alignment_inventory_verified_2026-08-01.csv": 24,
    "ena_human_wxs_cram_all_candidates_2026-08-01.csv": 5944,
    "ena_human_wxs_bam_without_index_all_candidates_2026-08-01.csv": 903
  },
  "known_alignment_bytes_total": 108989836671733,
  "known_alignment_bytes_download_verified": 108723978698122,
  "known_alignment_bytes_verified_indexed": 98884733231276,
  "resource_class_summary": {
    "verified_indexed_alignment_pairs": 13948,
    "verified_downloadable_alignments_without_verified_index": 895,
    "downloadable_raw_wes_fastq_files": 120,
    "raw_wes_fastq_runs": 60,
    "raw_wes_fastq_known_bytes": 787004873942,
    "raw_fastq_inventory": "public_brca_candidate_raw_wes_inventory_2026-08-01.csv",
    "curated_or_benchmark_complete_wes_alignment_objects": 2869,
    "repository_metadata_only_alignment_objects_requiring_qc": 12009
  },
  "repository_summary": [
    {
      "repository": "1000 Genomes Project",
      "candidate_objects": 2551,
      "alignment_download_verified_objects": 2551,
      "verified_indexed_pair_objects": 2551,
      "downloadable_alignment_without_verified_index": 0,
      "failed_or_unverified_objects": 0,
      "repository_scoped_sample_ids": 2551,
      "objects_with_known_size": 2551,
      "known_alignment_bytes": 25014290226354,
      "min_alignment_bytes": 2275616047,
      "median_alignment_bytes": 9217329280,
      "max_alignment_bytes": 99733659048,
      "verified_indexed_objects_with_known_size": 2551,
      "verified_indexed_alignment_bytes": 25014290226354,
      "verified_indexed_min_alignment_bytes": 2275616047,
      "verified_indexed_median_alignment_bytes": 9217329280,
      "verified_indexed_max_alignment_bytes": 99733659048,
      "objects_with_official_md5": 2551,
      "exact_content_groups_among_md5_objects": 2551,
      "extra_url_aliases_to_exact_content": 0,
      "objects_flagged_for_size_review": 3
    },
    {
      "repository": "Broad GATK test data (AWS Open Data)",
      "candidate_objects": 1,
      "alignment_download_verified_objects": 1,
      "verified_indexed_pair_objects": 1,
      "downloadable_alignment_without_verified_index": 0,
      "failed_or_unverified_objects": 0,
      "repository_scoped_sample_ids": 1,
      "objects_with_known_size": 1,
      "known_alignment_bytes": 13105459770,
      "min_alignment_bytes": 13105459770,
      "median_alignment_bytes": 13105459770,
      "max_alignment_bytes": 13105459770,
      "verified_indexed_objects_with_known_size": 1,
      "verified_indexed_alignment_bytes": 13105459770,
      "verified_indexed_min_alignment_bytes": 13105459770,
      "verified_indexed_median_alignment_bytes": 13105459770,
      "verified_indexed_max_alignment_bytes": 13105459770,
      "objects_with_official_md5": 0,
      "exact_content_groups_among_md5_objects": 0,
      "extra_url_aliases_to_exact_content": 0,
      "objects_flagged_for_size_review": 0
    },
    {
      "repository": "DepMap CCLE (AWS Open Data)",
      "candidate_objects": 476,
      "alignment_download_verified_objects": 476,
      "verified_indexed_pair_objects": 476,
      "downloadable_alignment_without_verified_index": 0,
      "failed_or_unverified_objects": 0,
      "repository_scoped_sample_ids": 476,
      "objects_with_known_size": 476,
      "known_alignment_bytes": 5620503363053,
      "min_alignment_bytes": 4106703881,
      "median_alignment_bytes": 7823961972,
      "max_alignment_bytes": 65228937128,
      "verified_indexed_objects_with_known_size": 476,
      "verified_indexed_alignment_bytes": 5620503363053,
      "verified_indexed_min_alignment_bytes": 4106703881,
      "verified_indexed_median_alignment_bytes": 7823961972,
      "verified_indexed_max_alignment_bytes": 65228937128,
      "objects_with_official_md5": 0,
      "exact_content_groups_among_md5_objects": 0,
      "extra_url_aliases_to_exact_content": 0,
      "objects_flagged_for_size_review": 3
    },
    {
      "repository": "European Nucleotide Archive (ENA)",
      "candidate_objects": 11532,
      "alignment_download_verified_objects": 11497,
      "verified_indexed_pair_objects": 10602,
      "downloadable_alignment_without_verified_index": 895,
      "failed_or_unverified_objects": 35,
      "repository_scoped_sample_ids": 6882,
      "objects_with_known_size": 11532,
      "known_alignment_bytes": 75763144941294,
      "min_alignment_bytes": 75848,
      "median_alignment_bytes": 1999715268,
      "max_alignment_bytes": 192678672711,
      "verified_indexed_objects_with_known_size": 10602,
      "verified_indexed_alignment_bytes": 65658041500837,
      "verified_indexed_min_alignment_bytes": 75848,
      "verified_indexed_median_alignment_bytes": 1135009180,
      "verified_indexed_max_alignment_bytes": 192678672711,
      "objects_with_official_md5": 11532,
      "exact_content_groups_among_md5_objects": 11521,
      "extra_url_aliases_to_exact_content": 11,
      "objects_flagged_for_size_review": 5415
    },
    {
      "repository": "Google Brain GIAB benchmark",
      "candidate_objects": 266,
      "alignment_download_verified_objects": 266,
      "verified_indexed_pair_objects": 266,
      "downloadable_alignment_without_verified_index": 0,
      "failed_or_unverified_objects": 0,
      "repository_scoped_sample_ids": 9,
      "objects_with_known_size": 266,
      "known_alignment_bytes": 1210442462790,
      "min_alignment_bytes": 1797772533,
      "median_alignment_bytes": 4494071029,
      "max_alignment_bytes": 9079169644,
      "verified_indexed_objects_with_known_size": 266,
      "verified_indexed_alignment_bytes": 1210442462790,
      "verified_indexed_min_alignment_bytes": 1797772533,
      "verified_indexed_median_alignment_bytes": 4494071029,
      "verified_indexed_max_alignment_bytes": 9079169644,
      "objects_with_official_md5": 266,
      "exact_content_groups_among_md5_objects": 242,
      "extra_url_aliases_to_exact_content": 24,
      "objects_flagged_for_size_review": 0
    },
    {
      "repository": "NCBI SEQC2",
      "candidate_objects": 24,
      "alignment_download_verified_objects": 24,
      "verified_indexed_pair_objects": 24,
      "downloadable_alignment_without_verified_index": 0,
      "failed_or_unverified_objects": 0,
      "repository_scoped_sample_ids": 2,
      "objects_with_known_size": 24,
      "known_alignment_bytes": 365354655738,
      "min_alignment_bytes": 2843668056,
      "median_alignment_bytes": 12327118033,
      "max_alignment_bytes": 40070123590,
      "verified_indexed_objects_with_known_size": 24,
      "verified_indexed_alignment_bytes": 365354655738,
      "verified_indexed_min_alignment_bytes": 2843668056,
      "verified_indexed_median_alignment_bytes": 12327118033,
      "verified_indexed_max_alignment_bytes": 40070123590,
      "objects_with_official_md5": 24,
      "exact_content_groups_among_md5_objects": 24,
      "extra_url_aliases_to_exact_content": 0,
      "objects_flagged_for_size_review": 0
    },
    {
      "repository": "NIST Genome in a Bottle / NCBI",
      "candidate_objects": 28,
      "alignment_download_verified_objects": 28,
      "verified_indexed_pair_objects": 28,
      "downloadable_alignment_without_verified_index": 0,
      "failed_or_unverified_objects": 0,
      "repository_scoped_sample_ids": 5,
      "objects_with_known_size": 28,
      "known_alignment_bytes": 1002995562734,
      "min_alignment_bytes": 3020450026,
      "median_alignment_bytes": 48979728333,
      "max_alignment_bytes": 61185075125,
      "verified_indexed_objects_with_known_size": 28,
      "verified_indexed_alignment_bytes": 1002995562734,
      "verified_indexed_min_alignment_bytes": 3020450026,
      "verified_indexed_median_alignment_bytes": 48979728333,
      "verified_indexed_max_alignment_bytes": 61185075125,
      "objects_with_official_md5": 27,
      "exact_content_groups_among_md5_objects": 27,
      "extra_url_aliases_to_exact_content": 0,
      "objects_flagged_for_size_review": 10
    }
  ],
  "size_bin_summary": [
    {
      "size_bin": "<100 MiB",
      "candidate_objects": 275,
      "alignment_download_verified_objects": 275,
      "verified_indexed_pair_objects": 215,
      "known_alignment_bytes": 9541194766,
      "alignment_download_verified_bytes": 9541194766,
      "verified_indexed_alignment_bytes": 8504672581,
      "fraction_of_candidate_objects": "0.01848367"
    },
    {
      "size_bin": "100 MiB-<1 GiB",
      "candidate_objects": 5067,
      "alignment_download_verified_objects": 5053,
      "verified_indexed_pair_objects": 5043,
      "known_alignment_bytes": 3111587404687,
      "alignment_download_verified_bytes": 3103409530560,
      "verified_indexed_alignment_bytes": 3099509352316,
      "fraction_of_candidate_objects": "0.34056997"
    },
    {
      "size_bin": "1-<5 GiB",
      "candidate_objects": 2008,
      "alignment_download_verified_objects": 2005,
      "verified_indexed_pair_objects": 1819,
      "known_alignment_bytes": 6607370514670,
      "alignment_download_verified_bytes": 6595856759804,
      "verified_indexed_alignment_bytes": 5887119297970,
      "fraction_of_candidate_objects": "0.13496438"
    },
    {
      "size_bin": "5-<10 GiB",
      "candidate_objects": 3590,
      "alignment_download_verified_objects": 3580,
      "verified_indexed_pair_objects": 3312,
      "known_alignment_bytes": 28577862468069,
      "alignment_download_verified_bytes": 28501697118452,
      "verified_indexed_alignment_bytes": 26275868412423,
      "fraction_of_candidate_objects": "0.24129587"
    },
    {
      "size_bin": "10-<20 GiB",
      "candidate_objects": 3282,
      "alignment_download_verified_objects": 3277,
      "verified_indexed_pair_objects": 3012,
      "known_alignment_bytes": 47602069787433,
      "alignment_download_verified_bytes": 47535475073915,
      "verified_indexed_alignment_bytes": 43688725647021,
      "fraction_of_candidate_objects": "0.22059417"
    },
    {
      "size_bin": "20-<50 GiB",
      "candidate_objects": 567,
      "alignment_download_verified_objects": 564,
      "verified_indexed_pair_objects": 459,
      "known_alignment_bytes": 17379571810487,
      "alignment_download_verified_bytes": 17276165529004,
      "verified_indexed_alignment_bytes": 14306160001399,
      "fraction_of_candidate_objects": "0.03810996"
    },
    {
      "size_bin": ">=50 GiB",
      "candidate_objects": 89,
      "alignment_download_verified_objects": 89,
      "verified_indexed_pair_objects": 88,
      "known_alignment_bytes": 5701833491621,
      "alignment_download_verified_bytes": 5701833491621,
      "verified_indexed_alignment_bytes": 5618845847566,
      "fraction_of_candidate_objects": "0.00598199"
    },
    {
      "size_bin": "Unknown",
      "candidate_objects": 0,
      "alignment_download_verified_objects": 0,
      "verified_indexed_pair_objects": 0,
      "known_alignment_bytes": 0,
      "alignment_download_verified_bytes": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_candidate_objects": "0.00000000"
    }
  ],
  "repository_verified_indexed_size_bin_summary": [
    {
      "repository": "1000 Genomes Project",
      "size_bin": "<100 MiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "1000 Genomes Project",
      "size_bin": "100 MiB-<1 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "1000 Genomes Project",
      "size_bin": "1-<5 GiB",
      "verified_indexed_pair_objects": 191,
      "verified_indexed_alignment_bytes": 918644544290,
      "fraction_of_repository_verified_indexed_pairs": "0.07487260"
    },
    {
      "repository": "1000 Genomes Project",
      "size_bin": "5-<10 GiB",
      "verified_indexed_pair_objects": 1584,
      "verified_indexed_alignment_bytes": 12843573977315,
      "fraction_of_repository_verified_indexed_pairs": "0.62093297"
    },
    {
      "repository": "1000 Genomes Project",
      "size_bin": "10-<20 GiB",
      "verified_indexed_pair_objects": 730,
      "verified_indexed_alignment_bytes": 9739159559646,
      "fraction_of_repository_verified_indexed_pairs": "0.28616229"
    },
    {
      "repository": "1000 Genomes Project",
      "size_bin": "20-<50 GiB",
      "verified_indexed_pair_objects": 43,
      "verified_indexed_alignment_bytes": 1277417477065,
      "fraction_of_repository_verified_indexed_pairs": "0.01685613"
    },
    {
      "repository": "1000 Genomes Project",
      "size_bin": ">=50 GiB",
      "verified_indexed_pair_objects": 3,
      "verified_indexed_alignment_bytes": 235494668038,
      "fraction_of_repository_verified_indexed_pairs": "0.00117601"
    },
    {
      "repository": "1000 Genomes Project",
      "size_bin": "Unknown",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "Broad GATK test data (AWS Open Data)",
      "size_bin": "<100 MiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "Broad GATK test data (AWS Open Data)",
      "size_bin": "100 MiB-<1 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "Broad GATK test data (AWS Open Data)",
      "size_bin": "1-<5 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "Broad GATK test data (AWS Open Data)",
      "size_bin": "5-<10 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "Broad GATK test data (AWS Open Data)",
      "size_bin": "10-<20 GiB",
      "verified_indexed_pair_objects": 1,
      "verified_indexed_alignment_bytes": 13105459770,
      "fraction_of_repository_verified_indexed_pairs": "1.00000000"
    },
    {
      "repository": "Broad GATK test data (AWS Open Data)",
      "size_bin": "20-<50 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "Broad GATK test data (AWS Open Data)",
      "size_bin": ">=50 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "Broad GATK test data (AWS Open Data)",
      "size_bin": "Unknown",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "DepMap CCLE (AWS Open Data)",
      "size_bin": "<100 MiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "DepMap CCLE (AWS Open Data)",
      "size_bin": "100 MiB-<1 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "DepMap CCLE (AWS Open Data)",
      "size_bin": "1-<5 GiB",
      "verified_indexed_pair_objects": 92,
      "verified_indexed_alignment_bytes": 449048960556,
      "fraction_of_repository_verified_indexed_pairs": "0.19327731"
    },
    {
      "repository": "DepMap CCLE (AWS Open Data)",
      "size_bin": "5-<10 GiB",
      "verified_indexed_pair_objects": 247,
      "verified_indexed_alignment_bytes": 1823835232180,
      "fraction_of_repository_verified_indexed_pairs": "0.51890756"
    },
    {
      "repository": "DepMap CCLE (AWS Open Data)",
      "size_bin": "10-<20 GiB",
      "verified_indexed_pair_objects": 82,
      "verified_indexed_alignment_bytes": 1360303623165,
      "fraction_of_repository_verified_indexed_pairs": "0.17226891"
    },
    {
      "repository": "DepMap CCLE (AWS Open Data)",
      "size_bin": "20-<50 GiB",
      "verified_indexed_pair_objects": 52,
      "verified_indexed_alignment_bytes": 1804096631811,
      "fraction_of_repository_verified_indexed_pairs": "0.10924370"
    },
    {
      "repository": "DepMap CCLE (AWS Open Data)",
      "size_bin": ">=50 GiB",
      "verified_indexed_pair_objects": 3,
      "verified_indexed_alignment_bytes": 183218915341,
      "fraction_of_repository_verified_indexed_pairs": "0.00630252"
    },
    {
      "repository": "DepMap CCLE (AWS Open Data)",
      "size_bin": "Unknown",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "European Nucleotide Archive (ENA)",
      "size_bin": "<100 MiB",
      "verified_indexed_pair_objects": 215,
      "verified_indexed_alignment_bytes": 8504672581,
      "fraction_of_repository_verified_indexed_pairs": "0.02027919"
    },
    {
      "repository": "European Nucleotide Archive (ENA)",
      "size_bin": "100 MiB-<1 GiB",
      "verified_indexed_pair_objects": 5043,
      "verified_indexed_alignment_bytes": 3099509352316,
      "fraction_of_repository_verified_indexed_pairs": "0.47566497"
    },
    {
      "repository": "European Nucleotide Archive (ENA)",
      "size_bin": "1-<5 GiB",
      "verified_indexed_pair_objects": 1331,
      "verified_indexed_alignment_bytes": 3743680030826,
      "fraction_of_repository_verified_indexed_pairs": "0.12554235"
    },
    {
      "repository": "European Nucleotide Archive (ENA)",
      "size_bin": "5-<10 GiB",
      "verified_indexed_pair_objects": 1399,
      "verified_indexed_alignment_bytes": 11050921395043,
      "fraction_of_repository_verified_indexed_pairs": "0.13195623"
    },
    {
      "repository": "European Nucleotide Archive (ENA)",
      "size_bin": "10-<20 GiB",
      "verified_indexed_pair_objects": 2195,
      "verified_indexed_alignment_bytes": 32518842830098,
      "fraction_of_repository_verified_indexed_pairs": "0.20703641"
    },
    {
      "repository": "European Nucleotide Archive (ENA)",
      "size_bin": "20-<50 GiB",
      "verified_indexed_pair_objects": 347,
      "verified_indexed_alignment_bytes": 10613407722887,
      "fraction_of_repository_verified_indexed_pairs": "0.03272967"
    },
    {
      "repository": "European Nucleotide Archive (ENA)",
      "size_bin": ">=50 GiB",
      "verified_indexed_pair_objects": 72,
      "verified_indexed_alignment_bytes": 4623175497086,
      "fraction_of_repository_verified_indexed_pairs": "0.00679117"
    },
    {
      "repository": "European Nucleotide Archive (ENA)",
      "size_bin": "Unknown",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "Google Brain GIAB benchmark",
      "size_bin": "<100 MiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "Google Brain GIAB benchmark",
      "size_bin": "100 MiB-<1 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "Google Brain GIAB benchmark",
      "size_bin": "1-<5 GiB",
      "verified_indexed_pair_objects": 193,
      "verified_indexed_alignment_bytes": 733036256498,
      "fraction_of_repository_verified_indexed_pairs": "0.72556391"
    },
    {
      "repository": "Google Brain GIAB benchmark",
      "size_bin": "5-<10 GiB",
      "verified_indexed_pair_objects": 73,
      "verified_indexed_alignment_bytes": 477406206292,
      "fraction_of_repository_verified_indexed_pairs": "0.27443609"
    },
    {
      "repository": "Google Brain GIAB benchmark",
      "size_bin": "10-<20 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "Google Brain GIAB benchmark",
      "size_bin": "20-<50 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "Google Brain GIAB benchmark",
      "size_bin": ">=50 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "Google Brain GIAB benchmark",
      "size_bin": "Unknown",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "NCBI SEQC2",
      "size_bin": "<100 MiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "NCBI SEQC2",
      "size_bin": "100 MiB-<1 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "NCBI SEQC2",
      "size_bin": "1-<5 GiB",
      "verified_indexed_pair_objects": 8,
      "verified_indexed_alignment_bytes": 30076332723,
      "fraction_of_repository_verified_indexed_pairs": "0.33333333"
    },
    {
      "repository": "NCBI SEQC2",
      "size_bin": "5-<10 GiB",
      "verified_indexed_pair_objects": 3,
      "verified_indexed_alignment_bytes": 21768354956,
      "fraction_of_repository_verified_indexed_pairs": "0.12500000"
    },
    {
      "repository": "NCBI SEQC2",
      "size_bin": "10-<20 GiB",
      "verified_indexed_pair_objects": 4,
      "verified_indexed_alignment_bytes": 57314174342,
      "fraction_of_repository_verified_indexed_pairs": "0.16666667"
    },
    {
      "repository": "NCBI SEQC2",
      "size_bin": "20-<50 GiB",
      "verified_indexed_pair_objects": 9,
      "verified_indexed_alignment_bytes": 256195793717,
      "fraction_of_repository_verified_indexed_pairs": "0.37500000"
    },
    {
      "repository": "NCBI SEQC2",
      "size_bin": ">=50 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "NCBI SEQC2",
      "size_bin": "Unknown",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "NIST Genome in a Bottle / NCBI",
      "size_bin": "<100 MiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "NIST Genome in a Bottle / NCBI",
      "size_bin": "100 MiB-<1 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "NIST Genome in a Bottle / NCBI",
      "size_bin": "1-<5 GiB",
      "verified_indexed_pair_objects": 4,
      "verified_indexed_alignment_bytes": 12633173077,
      "fraction_of_repository_verified_indexed_pairs": "0.14285714"
    },
    {
      "repository": "NIST Genome in a Bottle / NCBI",
      "size_bin": "5-<10 GiB",
      "verified_indexed_pair_objects": 6,
      "verified_indexed_alignment_bytes": 58363246637,
      "fraction_of_repository_verified_indexed_pairs": "0.21428571"
    },
    {
      "repository": "NIST Genome in a Bottle / NCBI",
      "size_bin": "10-<20 GiB",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    },
    {
      "repository": "NIST Genome in a Bottle / NCBI",
      "size_bin": "20-<50 GiB",
      "verified_indexed_pair_objects": 8,
      "verified_indexed_alignment_bytes": 355042375919,
      "fraction_of_repository_verified_indexed_pairs": "0.28571429"
    },
    {
      "repository": "NIST Genome in a Bottle / NCBI",
      "size_bin": ">=50 GiB",
      "verified_indexed_pair_objects": 10,
      "verified_indexed_alignment_bytes": 576956767101,
      "fraction_of_repository_verified_indexed_pairs": "0.35714286"
    },
    {
      "repository": "NIST Genome in a Bottle / NCBI",
      "size_bin": "Unknown",
      "verified_indexed_pair_objects": 0,
      "verified_indexed_alignment_bytes": 0,
      "fraction_of_repository_verified_indexed_pairs": "0.00000000"
    }
  ],
  "input_sha256": {
    "baseline_csv": "915c1ef20d66075281a822d2e242c69225ed7a05efde24cb5e4c2af11934e753",
    "baseline_json": "3287dcbda995c9e2963ba1babfe61a69908c1e9bb934cfdd5586321c91400b6f",
    "broad_csv": "289c95c6527ff3c318c4b04bf0aa9712593f11252c879ceb2db7bbeaca417af3",
    "broad_json": "b70aff2d36fb28f12ab1d985e237d2544a1bdd877c9bd2892a931337e656fac2",
    "probe_progress": "55bf172fda2537d751178de1d9c26f22e260885f8aa63c15fe9dcc44f8e50dfa",
    "seqc2_csv": "014f0f374b0fb1141126a99aa7becb152710c35abf5863af795b55f4f8c50be2",
    "seqc2_json": "c09c579a16ec2242a06ddfbf434839b9b89d50d6f19c99ad9d4f25350e56463b",
    "cram_csv": "cea23f4019af3f3e583a0055541973d428bc0841b8dfc38d7b274854aeb6f2d8",
    "cram_json": "3fa345a77c65b36edf1419b5ee3c7991ebaadda2be55cc1d655565774539a19a",
    "cram_progress": "9f2e592ab0fad8caad98ccaa2106c963139b91ee6fbfe94e2e88f00e712a6718",
    "unindexed_csv": "f79ff9aebe1041e3572d98c4bf0633974a8bbc484567e0017980899ecf700b60",
    "unindexed_json": "b3106475a720e5d6455f04726de97924dd5b71cd28869439acad90023aabe482",
    "unindexed_progress": "aab42b1aeeb668553a10a680205a1f626bf4c5722001f95313c53153dd6493ec",
    "truth_csv": "6b6cfff2ddb439dd242592eed7cdaf6beb45e59d5fa16b8551c1a62f534e12bb",
    "truth_json": "b9c432a7b9e0200cfed28eba89ae8494a9467160403e84ebbdbd0d6cae8abfe0",
    "raw_fastq_csv": "b0e1c7cc15917e70d4d7cf8bfbf9879121060cac3c864844d4a36493e0885660"
  },
  "outputs": {
    "inventory_csv": "consolidated_public_complete_wes_2026-08-01.csv",
    "inventory_csv_sha256": "5f80461ab1a62a5d55688f7fd59a0267c0665275bc7ecbc352f0b87569a3ccff",
    "repository_summary_csv": "consolidated_public_complete_wes_2026-08-01_repository_summary.csv",
    "repository_summary_csv_sha256": "077da3cf3c92724c087c05cf8007454e5b26db3f38e364ce1fb89e73eff59e42",
    "size_bins_csv": "consolidated_public_complete_wes_2026-08-01_size_bins.csv",
    "size_bins_csv_sha256": "43ed00a89aa23660c02e8b5a78abc0fab5d4de61d2bdec2f62ad352f0cfa2ffe",
    "repository_verified_indexed_size_bins_csv": "consolidated_public_complete_wes_2026-08-01_repository_verified_indexed_size_bins.csv",
    "repository_verified_indexed_size_bins_csv_sha256": "8f26cb794ebda417d7c624dabb89753fa6cf275d260087677ec10baf6fc57afa"
  }
}